121 projects tagged "Chemistry"

Download No website Updated 16 Oct 2003 Modama

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Pop 10.54
Vit 1.00

Modama is a software project for processing and analyzing 2D detector data (images) provided by any available detectors, mainly SAX and WAX.

Download Website Updated 17 Jan 2008 xmds

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Pop 37.83
Vit 2.57

XMDS is a code generator that integrates equations. You write them down in human readable form in an XML file, and it goes away and writes and compiles a C++ program that integrates those equations as fast as it can possibly be done in your architecture.

No download Website Updated 23 Mar 2004 ODPdom

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Pop 15.68
Vit 1.00

ODPdom is a simple DOM (Document Object Model) parser. It can process large XML files.

No download Website Updated 07 Sep 2005 Vigyaan

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Pop 27.75
Vit 1.52

Vigyaan is an electronic workbench for bioinformatics, computational biology, and computational chemistry. It is a Linux-live CD containing all the required software to boot the computer with ready to use modeling software. It includes Artemis, Bioperl, BLAST (NCBI-tools), ClustalX, Cn3D, EMBOSS tools, Garlic, GROMACS, Ghemical, GNU R, Gnuplot, GIMP, ImageMagick, JMol, MPQC, NJPlot, Open Babel, Octave, PSI3, PyMOL, Rasmol, Raster3D, SMILE, TINKER, XDrawChem, Xmgr, and Xfig.

Download Website Updated 29 Sep 2011 Gabedit

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Pop 54.68
Vit 6.42

Gabedit is a graphical interface for the FireFly, Gamess-US, Gaussian, Molcas, Molpro, MPQC, NWChem, OpenMopac, ORCA, and Q-Chem computational chemistry packages. It includes a 3D molecule editor and viewer. Most major molecular file formats are supported, and graphics can be exported in many formats.

No download Website Updated 07 Jun 2004 Teriodic

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Pop 35.11
Vit 1.00

Teriodic is a training tool for the periodic table of the elements. Starting from 1 (hydrogen), it quizzes the abreviations of each element in numerical order. If you make a mistake, it shows you the next five elements and lets you start again from hydrogen. Knowing the periodic table makes it possible to estimate what chemicals look like and how they react.

Download Website Updated 04 Aug 2004 PhosphoFind

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Pop 17.26
Vit 1.00

PhosphoFind locates and quantifies phosphorylated peptides and proteins from a set of four MALDI mass spectra run in linear positive, linear negative, reflectron positive, and reflectron negative modes.

Download No website Updated 24 Feb 2011 Bioinformatics Benchmark System

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Pop 27.29
Vit 1.00

The Bioinformatics Benchmark System is an attempt to build a reasonable testing framework, tests, and data, to enable end users and vendors to probe the performance of their systems. It is not trying to be the last word in informatics benchmarking, as there are simply too many codes, tests, data sets, and databases. The goal is to create a core of tests that all may download and use to probe specific elements of system performance. The end goal is to enable a pluggable set of tests, including the core tests, so that performance data may be gathered.

Download Website Updated 27 Oct 2005 JFDraw

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Pop 115.30
Vit 3.99

JFDraw is a Java vector graphics drawing application and library package. It is focused on vector graph drawing field. It is useful for mechanical, electronic, architectural graph drawing applications, or even business process or workflow graphs.

Download No website Updated 24 Aug 2004 pyPeriod

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Pop 19.21
Vit 59.70

pyPeriod is a periodic table of elements. A wxPython and a Tkinter GUI are included. It enables calculation of molecular masses and shows data for every element.

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Project Spotlight

openAviToGif

A video to GIF converter.

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Project Spotlight

libcap-ng

An alternate POSIX capabilities library.